Class encapsulating DICOM file operations. More...

#include <mdsDicomSlice.h>

Inheritance diagram for mds::img::CDicomSlice:

[legend]

Public Types
enum	{ CLASS_IMAGE }
	Templates that require members of the CImage class may use this enum to check the existence. More...
enum	{ DEFAULT_MARGIN = 16 }
	Default size of the slice margin. More...
enum	{ CLASS_SERIALIZABLE }
	Templates that require members of the CSerializable class may use this enum to check the existence. More...
enum	{ VERSION = 0x33 }
	Current serialization interface version. More...
enum	{ MAX_NAME_LENGTH = 32 }
	Maximal length of a data entity name in characters. More...
enum	{ CLASS_OBJECT }
	Templates that require members of the CObject class can use this enum to check the existence. More...
enum	{ HEAP_OBJECT = 0x70616568 }
	Signature used to recognize objects on the heap. More...
typedef CImageBase< CImage< T, Allocator > >	tBase
	Base class.
typedef Allocator< T >	tDataStorage
	Image data storage type.
typedef CImage< T, Allocator >	tImage
	Image type.
typedef T	tPixel
	Image pixel type.
typedef CRect< CImage >	tRect
	View of the image (i.e. rectangle).
typedef CImageRow< CImage >	tRow
	Image row (the x coordinate is varying while the y is fixed).
Public Member Functions
CImage &	abs ()
	Absolute value of all pixels.
T &	at (tSize x, tSize y)
	Returns reference to the pixel [x][y].
const T &	at (tSize x, tSize y) const
T &	at (tSize i)
	Returns the subscripted pixel.
const T &	at (tSize i) const
	CDicomSlice ()
	Default constructor.
	CDicomSlice (tSize XSize, tSize YSize, tSize Margin=CSlice::DEFAULT_MARGIN)
	Constructor.
	CDicomSlice (const CDImage &Image)
	Copy constructor.
	CDicomSlice (const CDImage &Image, EMakeRef)
	Copy constructor.
	CDicomSlice (const CSlice &Slice)
	Copy constructor.
	CDicomSlice (const CSlice &Slice, EMakeRef)
	Copy constructor.
	CDicomSlice (const CDicomSlice &Slice)
	Copy constructor.
	CDicomSlice (const CDicomSlice &Slice, EMakeRef)
	Copy constructor.
bool	checkPosition (tSize x, tSize y) const
	Checks the pixel position.
T	color2Pixel (CColor color) const
	Converts a specified color to the image pixel format and range.
template<typename Derived >
CImage &	convert (const CImageBase< Derived > &Image)
	Conversion of images of different types.
template<typename Derived >
CImage< T, A > &	convert (const CImageBase< Derived > &Image)
CSlice &	create (tSize XSize, tSize YSize, tSize Margin=DEFAULT_MARGIN)
	Creates a new slice.
CSlice &	create (const CSlice &Slice)
	Creates a new slice.
CSlice &	create (const CSlice &Slice, EMakeRef)
	Creates a new slice.
CImage &	create (const CSize2i &Size, tSize Margin=0)
	Resizes the image data.
CImage &	create (const CImage &Image, tSize x, tSize y, tSize XSize, tSize YSize)
	Creates subimage of a given image.
CImage &	create (const CImage &Image, tSize x, tSize y, tSize XSize, tSize YSize, EMakeRef)
	Creates subimage of a given image.
CImage &	create (const tRect &Image)
	Creates copy of a given image rectangle.
CImage &	create (const tRect &Image, EMakeRef)
	Creates reference to a given image rectangle.
CImage &	create (const CImage &Image)
	Creates copy of an image.
CImage &	create (const CImage &Image, EMakeRef)
	Creates reference to an image.
CImage &	cut (const T &Lower, const T &Upper)
	Cuts range of pixel values.
template<class S >
void	deserialize (mds::mod::CChannelSerializer< S > &Reader)
	Deserializes all class members.
template<class S >
void	deserialize (mds::mod::CChannelSerializer< S > &Reader)
	Deserializes all class members.
CImage &	fill (const T &c)
	Fills the image using a given pixel value.
CImage &	fillEntire (const T &c)
	Fills the entire image including its margin using a given pixel value.
CImage &	fillMargin (const T &c)
	Pads the image margin with constant value.
template<class Function >
Function	forEach (Function Func)
	Calls function object for every image pixel.
template<class Function >
Function	forEach (Function Func) const
	Calls function object for every image pixel.
template<class Function >
Function	forEach (Function Func)
	Calls a function object for every image pixel.
template<class Function >
Function	forEach (Function Func) const
	Calls a function object for every image pixel.
double	getDX () const
	Returns the real pixel size in x-axis.
double	getDY () const
	Returns the real pixel size in y-axis.
tSize	getIdx (tSize x, tSize y) const
	Calculates index of a specified pixel.
tImage &	getImpl ()
	Returns reference to the image implementation.
const tImage &	getImpl () const
int	getIndex () const
	Gets the slice position index.
tSize	getMargin () const
	Returns the image margin size in pixels.
EPlane	getOrientation () const
	Returns orientation of the slice plane.
double	getPosition () const
	Returns the slice position.
T *	getPtr ()
	Returns pointer to the image data.
const T *	getPtr () const
T *	getPtr (tSize x, tSize y)
	Returns pointer to the given pixel.
const T *	getPtr (tSize x, tSize y) const
int	getReferencesCount () const
	Returns the number of references.
T *	getRowPtr (tSize y)
	Returns pointer to the first element of the image row.
const T *	getRowPtr (tSize y) const
CSize2i &	getSize ()
	Returns size of the rectangle.
const CSize2i &	getSize () const
double	getThickness () const
	Returns the slice thickness.
tSize	getXOffset () const
	Returns column offset in x-axis.
tSize	getXSize () const
	Returns the image size (dimensions).
tSize	getYOffset () const
	Returns row offset in y-axis.
tSize	getYSize () const
tSize	height () const
T	interpolate (const CPoint3D &Point) const
	Bilinear subpixel value interpolation.
bool	isOnHeap () const
	Returns true if the object is allocated on the heap.
CImage &	limit (const T &Lower, const T &Upper)
	Clips a range of pixel values.
bool	loadDicom (mds::mod::CChannel *pChannel, bool load_image_data=true)
	Loads DICOM slice from a given channel.
	MDS_ENTITY_COMPRESSION (mds::mod::CC_RAW)
	Standard method getEntityCompression().
	MDS_ENTITY_NAME ("Slice")
	Standard method getEntityName().
	MDS_SHAREDPTR (CDicomSlice)
	Smart pointer type.
	MDS_SHAREDPTR (CSlice)
	Smart pointer type.
	MDS_SHAREDPTR (CImage)
	Declare smart pointer type tSmartPtr.
CImage &	mirrorMargin ()
	Pads the image margin using a simple mirroring.
T &	operator() (tSize x, tSize y)
	Returns reference to the subscripted pixel [x][y].
const T &	operator() (tSize x, tSize y) const
T &	operator() (tSize i)
	Returns the subscripted pixel.
const T &	operator() (tSize i) const
template<class Derived >
CImage &	operator*= (const CImageBase< Derived > &Image)
	Pixel wise product.
template<typename U >
CImage &	operator*= (const CScalar< U > &c)
	Multiplies all pixels by scalar.
template<class Derived >
CImage< T, A > &	operator*= (const CImageBase< Derived > &Image)
template<typename U >
CImage< T, A > &	operator*= (const CScalar< U > &c)
template<class Derived >
CImage &	operator+= (const CImageBase< Derived > &Image)
	Pixel wise addition.
template<class U >
CImage &	operator+= (const CScalar< U > &c)
	Adds scalar to all pixels.
template<class Derived >
CImage< T, A > &	operator+= (const CImageBase< Derived > &Image)
template<typename U >
CImage< T, A > &	operator+= (const CScalar< U > &c)
template<class Derived >
CImage &	operator-= (const CImageBase< Derived > &Image)
	Pixel wise subtraction.
template<typename U >
CImage &	operator-= (const CScalar< U > &c)
	Subtracts scalar from all pixels.
template<class Derived >
CImage< T, A > &	operator-= (const CImageBase< Derived > &Image)
template<typename U >
CImage< T, A > &	operator-= (const CScalar< U > &c)
template<class Derived >
CImage &	operator/= (const CImageBase< Derived > &Image)
	Pixel wise division.
template<typename U >
CImage &	operator/= (const CScalar< U > &c)
	Divides all pixels by scalar.
template<class Derived >
CImage< T, A > &	operator/= (const CImageBase< Derived > &Image)
template<typename U >
CImage< T, A > &	operator/= (const CScalar< U > &c)
bool	operator< (const CSlice &Slice)
	Operator smaller for comparision of positions of two slices.
virtual CDicomSlice &	operator= (const CDImage &Image)
	Image assignment operator.
virtual CDicomSlice &	operator= (const CSlice &Slice)
	Slice assignment operator.
virtual CDicomSlice &	operator= (const CDicomSlice &Slice)
	Slice assignment operator.
template<class Function >
Function	pforEach (Function Func)
	Calls function object for every image pixel.
template<class Function >
Function	pforEach (Function Func) const
	Calls function object for every image pixel.
template<class Function >
Function	pforEach (Function Func)
	Calls a function object for every image pixel.
template<class Function >
Function	pforEach (Function Func) const
	Calls a function object for every image pixel.
tRect	rect (const CPoint2i &Position, const CSize2i &Size)
	Returns a specified sub-image (i.e. rectangle).
const tRect	rect (const CPoint2i &Position, const CSize2i &Size) const
tRect	rect (const CRange &XRange, const CRange &YRange)
	Returns a specified sub-image (i.e. rectangle).
const tRect	rect (const CRange &XRange, const CRange &YRange) const
CImage &	replace (const T &Value, const T &NewValue)
	Replaces all pixels of a given value by a specified value.
tRow	row (tSize y)
	Returns a specified row.
const tRow	row (tSize y) const
template<class S >
void	serialize (mds::mod::CChannelSerializer< S > &Writer)
	Serializes all class members.
template<class S >
void	serialize (mds::mod::CChannelSerializer< S > &Writer)
	Serializes all class members.
tImage &	set (tSize x, tSize y, const tPixel &Value)
	Sets the pixel at the position [x][y][z].
tImage &	set (tSize i, const tPixel &Value)
	Sets the subscripted pixel.
CImage &	set (tSize x, tSize y, const T &Value)
	Sets the pixel at the position [x][y].
CImage &	set (tSize i, const T &Value)
	Sets the subscripted voxel.
CSlice &	setIndex (int iIndex)
	Sets the position index.
CSlice &	setOrientation (EPlane ePlane)
	Sets the slice plane orientation.
CSlice &	setPixel (double dDX, double dDY)
	Sets the pixel size.
CSlice &	setPosition (double dPosition)
	Sets the slice position.
CSlice &	setThickness (double dThickness)
	Sets the slice thickness.
CImage &	subSample (const CImage &Image, tSize k=2, tSize l=2)
	Subsamples a given image and stores the result.
tSize	width () const
	Returns the image size (dimensions).
virtual	~CDicomSlice ()
	Destructor.
Static Public Member Functions
static int	getBlockSize ()
	Default block size.
static int	getCompression ()
	Default compression method.
static const char *	getName ()
	Default class name.
static void *	operator new (std::size_t Size)
	Allocates a new object on the heap.
Public Attributes
bool	m_bExplicitTransfer
	Explicit transfer syntax.
CVector3D	m_ImageOrientationX
	Slice X axis (first row) direction.
CVector3D	m_ImageOrientationY
	Slice Y axis (first column) direction.
CPoint3D	m_ImagePosition
	Slice base point position.
int	m_iSeriesNumber
	Series number.
int	m_iSliceNumber
	Slice number.
int	m_iWindowCenter
	Density window center position.
int	m_iWindowWidth
	Density window width.
std::string	m_sImageType
	Image type.
std::string	m_sModality
	Modality.
std::string	m_sPatientBirthday
	Patient birthday.
std::string	m_sPatientDescription
	Patient description.
std::string	m_sPatientId
	Patient Id.
std::string	m_sPatientName
	Patient name.
std::string	m_sPatientPosition
	Patient position.
std::string	m_sPatientSex
	Patient sex.
std::string	m_sScanOptions
	Scan options (AXIAL, etc.).
std::string	m_sSeriesDate
	Series date.
std::string	m_sSeriesDescription
	Series description.
std::string	m_sSeriesTime
	Series time.
std::string	m_sSeriesUid
	Series Uid.
std::string	m_sSliceFileName
	Slice file name.
std::string	m_sStudyDate
	Study date.
std::string	m_sStudyDescription
	Study description.
std::string	m_sStudyId
	Study id.
std::string	m_sStudyUid
	Study uid.
unsigned int	m_uPixelRepresentation
	Pixel value representation.
Protected Member Functions
void	addReference () const
	Increase the reference counter.
bool	delReference () const
	Decrease the reference counter.
Protected Attributes
tDataStorage	m_DataStorage
	Image data.
double	m_dDX
	Real pixel size.
double	m_dDY
double	m_dPosition
	Slice position.
double	m_dThickness
	Slice thickness.
EPlane	m_eOrientation
	Slice plane orientation.
int	m_iHeapObject
	Flag initialized if the object is on the heap.
int	m_iIndex
	Position index.
int	m_iReferences
	The number of references to the object.
tSize	m_Margin
	Image margin size.
CSize2i	m_Size
	Image dimensions.
tSize	m_YOffset
	Offset used by subscripting functions.
tSize	m_ZeroOffset
	Offset of the first pixel (0,0) from the beginning of data.

Detailed Description

Class encapsulating DICOM file operations.

Only CT and MR modalities are supported.

Member Typedef Documentation

template<typename T , template< typename > class Allocator = mds::base::CRefData>

typedef CImageBase<CImage<T, Allocator> > mds::img::CImage< T, Allocator >::tBase [inherited]

Base class.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

typedef Allocator<T> mds::img::CImage< T, Allocator >::tDataStorage [inherited]

Image data storage type.

typedef CImage< T, Allocator > mds::img::CImageBase< CImage< T, Allocator > >::tImage [inherited]

Image type.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

typedef T mds::img::CImage< T, Allocator >::tPixel [inherited]

Image pixel type.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

typedef CRect<CImage> mds::img::CImage< T, Allocator >::tRect [inherited]

View of the image (i.e. rectangle).

template<typename T , template< typename > class Allocator = mds::base::CRefData>

typedef CImageRow<CImage> mds::img::CImage< T, Allocator >::tRow [inherited]

Image row (the x coordinate is varying while the y is fixed).

Member Enumeration Documentation

template<typename T , template< typename > class Allocator = mds::base::CRefData>

anonymous enum [inherited]

Templates that require members of the CImage class may use this enum to check the existence.

Enumerator:

CLASS_IMAGE

anonymous enum [inherited]

Default size of the slice margin.

Enumerator:

DEFAULT_MARGIN

anonymous enum [inherited]

Templates that require members of the CSerializable class may use this enum to check the existence.

Enumerator:

CLASS_SERIALIZABLE

anonymous enum [inherited]

Current serialization interface version.

Enumerator:

VERSION

anonymous enum [inherited]

Maximal length of a data entity name in characters.

Enumerator:

MAX_NAME_LENGTH

anonymous enum [inherited]

Templates that require members of the CObject class can use this enum to check the existence.

Enumerator:

CLASS_OBJECT

anonymous enum [inherited]

Signature used to recognize objects on the heap.

Enumerator:

HEAP_OBJECT

Constructor & Destructor Documentation

mds::img::CDicomSlice::CDicomSlice ( )

Default constructor.

mds::img::CDicomSlice::CDicomSlice	(	tSize	XSize,
		tSize	YSize,
		tSize	Margin = `CSlice::DEFAULT_MARGIN`
	)

Constructor.

mds::img::CDicomSlice::CDicomSlice ( const CDImage & Image )

Copy constructor.

Makes a new copy of the image data.

mds::img::CDicomSlice::CDicomSlice	(	const CDImage &	Image,
		EMakeRef
	)

Copy constructor.

Makes a reference only.

mds::img::CDicomSlice::CDicomSlice ( const CSlice & Slice )

Copy constructor.

Makes a new copy of the image data.

mds::img::CDicomSlice::CDicomSlice	(	const CSlice &	Slice,
		EMakeRef
	)

Copy constructor.

Makes a reference only.

mds::img::CDicomSlice::CDicomSlice ( const CDicomSlice & Slice )

Copy constructor.

Makes a new copy of the image data.

mds::img::CDicomSlice::CDicomSlice	(	const CDicomSlice &	Slice,
		EMakeRef
	)

Copy constructor.

Makes a reference only.

mds::img::CDicomSlice::~CDicomSlice ( ) [virtual]

Destructor.

Member Function Documentation

template<typename T , template< typename > class A>

CImage< T, A > & CImage::abs ( ) [inherited]

Absolute value of all pixels.

Returns reference to this.

void mds::base::CObject::addReference ( ) const [protected, inherited]

Increase the reference counter.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

T& mds::img::CImage< T, Allocator >::at	(	tSize	x,
		tSize	y
	)		`[inherited]`

Returns reference to the pixel [x][y].

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

const T& mds::img::CImage< T, Allocator >::at	(	tSize	x,
		tSize	y
	)		const `[inherited]`

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

T& mds::img::CImage< T, Allocator >::at ( tSize i ) [inherited]

Returns the subscripted pixel.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

const T& mds::img::CImage< T, Allocator >::at ( tSize i ) const [inherited]

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class A>

bool CImage::checkPosition	(	tSize	x,
		tSize	y
	)		const `[inherited]`

Checks the pixel position.

Returns 'true' if a specified position is satisfactory.

template<typename T , template< typename > class A>

T CImage::color2Pixel ( CColor color ) const [inherited]

Converts a specified color to the image pixel format and range.

template<typename T , template< typename > class A>

template<typename Derived >

CImage< T, A > & mds::img::CImage< T, A >::convert ( const CImageBase< Derived > & Image ) [inherited]

Conversion of images of different types.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<typename Derived >

CImage<T,A>& mds::img::CImage< T, Allocator >::convert ( const CImageBase< Derived > & Image ) [inherited]

CSlice & mds::img::CSlice::create	(	tSize	XSize,
		tSize	YSize,
		tSize	Margin = `DEFAULT_MARGIN`
	)		`[inherited]`

Creates a new slice.

Reimplemented from mds::img::CImage< T, Allocator >.

CSlice & mds::img::CSlice::create ( const CSlice & Slice ) [inherited]

Creates a new slice.

Makes a new copy of the slice data.

CSlice & mds::img::CSlice::create	(	const CSlice &	Slice,
		EMakeRef
	)		`[inherited]`

Creates a new slice.

Makes only reference to the exisiting data.

template<typename T , template< typename > class A>

CImage< T, A > & mds::img::CImage< T, A >::create	(	const CSize2i &	Size,
		tSize	Margin = `0`
	)		`[inherited]`

Resizes the image data.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

CImage& mds::img::CImage< T, Allocator >::create	(	const CImage< T, Allocator > &	Image,
		tSize	x,
		tSize	y,
		tSize	XSize,
		tSize	YSize
	)		`[inherited]`

Creates subimage of a given image.

Makes own copy of the data.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

CImage& mds::img::CImage< T, Allocator >::create	(	const CImage< T, Allocator > &	Image,
		tSize	x,
		tSize	y,
		tSize	XSize,
		tSize	YSize,
		EMakeRef
	)		`[inherited]`

Creates subimage of a given image.

Makes only reference to the data.

template<typename T , template< typename > class A>

CImage< T, A > & CImage::create ( const tRect & Image ) [inherited]

Creates copy of a given image rectangle.

Makes own copy of the data.

template<typename T , template< typename > class A>

CImage< T, A > & CImage::create	(	const tRect &	Image,
		EMakeRef
	)		`[inherited]`

Creates reference to a given image rectangle.

Makes only a reference to the data.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

CImage& mds::img::CImage< T, Allocator >::create ( const CImage< T, Allocator > & Image ) [inherited]

Creates copy of an image.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

CImage& mds::img::CImage< T, Allocator >::create	(	const CImage< T, Allocator > &	Image,
		EMakeRef
	)		`[inherited]`

Creates reference to an image.

template<typename T , template< typename > class A>

CImage< T, A > & CImage::cut	(	const T &	Lower,
		const T &	Upper
	)		`[inherited]`

Cuts range of pixel values.

Returns reference to this.

bool mds::base::CObject::delReference ( ) const [protected, inherited]

Decrease the reference counter.

Returns true if the decremented number of references is lower or equal to zero and object must be deleted.

template<class S >

void mds::img::CSlice::deserialize ( mds::mod::CChannelSerializer< S > & Reader ) [inherited]

Deserializes all class members.

Reimplemented from mds::img::CImage< T, Allocator >.

template<class S >

void mds::img::CSlice::deserialize ( mds::mod::CChannelSerializer< S > & Reader ) [inherited]

Deserializes all class members.

Reimplemented from mds::img::CImage< T, Allocator >.

template<typename T , template< typename > class A>

CImage< T, A > & CImage::fill ( const T & c ) [inherited]

Fills the image using a given pixel value.

Returns reference to this.

template<typename T , template< typename > class A>

CImage< T, A > & CImage::fillEntire ( const T & c ) [inherited]

Fills the entire image including its margin using a given pixel value.

Returns reference to this.

template<typename T , template< typename > class A>

CImage< T, A > & CImage::fillMargin ( const T & c ) [inherited]

Pads the image margin with constant value.

Returns reference to this.

template<typename T , template< typename > class A>

template<class Function >

Function mds::img::CImage< T, A >::forEach ( Function Func ) [inherited]

Calls function object for every image pixel.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class A>

template<class Function >

Function mds::img::CImage< T, A >::forEach ( Function Func ) const [inherited]

Calls function object for every image pixel.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<class Function >

Function mds::img::CImage< T, Allocator >::forEach ( Function Func ) [inherited]

Calls a function object for every image pixel.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<class Function >

Function mds::img::CImage< T, Allocator >::forEach ( Function Func ) const [inherited]

Calls a function object for every image pixel.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

static int mds::mod::CSerializable::getBlockSize ( ) [static, inherited]

Default block size.

static int mds::mod::CSerializable::getCompression ( ) [static, inherited]

Default compression method.

double mds::img::CSlice::getDX ( ) const [inherited]

Returns the real pixel size in x-axis.

double mds::img::CSlice::getDY ( ) const [inherited]

Returns the real pixel size in y-axis.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tSize mds::img::CImage< T, Allocator >::getIdx	(	tSize	x,
		tSize	y
	)		const `[inherited]`

Calculates index of a specified pixel.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

tImage& mds::img::CImageBase< CImage< T, Allocator > >::getImpl ( ) [inherited]

Returns reference to the image implementation.

const tImage& mds::img::CImageBase< CImage< T, Allocator > >::getImpl ( ) const [inherited]

int mds::img::CSlice::getIndex ( ) const [inherited]

Gets the slice position index.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tSize mds::img::CImage< T, Allocator >::getMargin ( ) const [inherited]

Returns the image margin size in pixels.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

static const char* mds::mod::CSerializable::getName ( ) [static, inherited]

Default class name.

EPlane mds::img::CSlice::getOrientation ( ) const [inherited]

Returns orientation of the slice plane.

double mds::img::CSlice::getPosition ( ) const [inherited]

Returns the slice position.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

T* mds::img::CImage< T, Allocator >::getPtr ( ) [inherited]

Returns pointer to the image data.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

const T* mds::img::CImage< T, Allocator >::getPtr ( ) const [inherited]

template<typename T , template< typename > class Allocator = mds::base::CRefData>

T* mds::img::CImage< T, Allocator >::getPtr	(	tSize	x,
		tSize	y
	)		`[inherited]`

Returns pointer to the given pixel.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

const T* mds::img::CImage< T, Allocator >::getPtr	(	tSize	x,
		tSize	y
	)		const `[inherited]`

int mds::base::CObject::getReferencesCount ( ) const [inherited]

Returns the number of references.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

T* mds::img::CImage< T, Allocator >::getRowPtr ( tSize y ) [inherited]

Returns pointer to the first element of the image row.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

const T* mds::img::CImage< T, Allocator >::getRowPtr ( tSize y ) const [inherited]

template<typename T , template< typename > class Allocator = mds::base::CRefData>

CSize2i& mds::img::CImage< T, Allocator >::getSize ( ) [inherited]

Returns size of the rectangle.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

const CSize2i& mds::img::CImage< T, Allocator >::getSize ( ) const [inherited]

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

double mds::img::CSlice::getThickness ( ) const [inherited]

Returns the slice thickness.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tSize mds::img::CImage< T, Allocator >::getXOffset ( ) const [inherited]

Returns column offset in x-axis.

In other words, offset between two neighbouring image pixels in a row.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tSize mds::img::CImage< T, Allocator >::getXSize ( ) const [inherited]

Returns the image size (dimensions).

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tSize mds::img::CImage< T, Allocator >::getYOffset ( ) const [inherited]

Returns row offset in y-axis.

In other words, offset between two neighbouring image pixels in a column.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tSize mds::img::CImage< T, Allocator >::getYSize ( ) const [inherited]

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tSize mds::img::CImage< T, Allocator >::height ( ) const [inherited]

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class A>

T CImage::interpolate ( const CPoint3D & Point ) const [inherited]

Bilinear subpixel value interpolation.

bool mds::base::CObject::isOnHeap ( ) const [inherited]

Returns true if the object is allocated on the heap.

template<typename T , template< typename > class A>

CImage< T, A > & CImage::limit	(	const T &	Lower,
		const T &	Upper
	)		`[inherited]`

Clips a range of pixel values.

Returns reference to this.

bool mds::img::CDicomSlice::loadDicom	(	mds::mod::CChannel *	pChannel,
		bool	load_image_data = `true`
	)

Loads DICOM slice from a given channel.

Returns false on failure.

mds::img::CSlice::MDS_ENTITY_COMPRESSION ( mds::mod::CC_RAW ) [inherited]

Standard method getEntityCompression().

mds::img::CSlice::MDS_ENTITY_NAME ( "Slice" ) [inherited]

Standard method getEntityName().

mds::img::CDicomSlice::MDS_SHAREDPTR ( CDicomSlice )

Smart pointer type.

Declares type tSmartPtr.

mds::img::CSlice::MDS_SHAREDPTR ( CSlice ) [inherited]

Smart pointer type.

Declares type tSmartPtr.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

mds::img::CImage< T, Allocator >::MDS_SHAREDPTR ( CImage< T, Allocator > ) [inherited]

Declare smart pointer type tSmartPtr.

template<typename T , template< typename > class A>

CImage< T, A > & CImage::mirrorMargin ( ) [inherited]

Pads the image margin using a simple mirroring.

Returns reference to this.

static void* mds::base::CObject::operator new ( std::size_t Size ) [static, inherited]

Allocates a new object on the heap.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

T& mds::img::CImage< T, Allocator >::operator()	(	tSize	x,
		tSize	y
	)		`[inherited]`

Returns reference to the subscripted pixel [x][y].

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

const T& mds::img::CImage< T, Allocator >::operator()	(	tSize	x,
		tSize	y
	)		const `[inherited]`

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

T& mds::img::CImage< T, Allocator >::operator() ( tSize i ) [inherited]

Returns the subscripted pixel.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

const T& mds::img::CImage< T, Allocator >::operator() ( tSize i ) const [inherited]

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class A>

template<class Derived >

CImage< T, A > & mds::img::CImage< T, A >::operator*= ( const CImageBase< Derived > & Image ) [inherited]

Pixel wise product.

template<typename T , template< typename > class A>

template<typename U >

CImage< T, A > & mds::img::CImage< T, A >::operator*= ( const CScalar & c ) [inherited]

Multiplies all pixels by scalar.

An operator that allows conversion U -> T must be defined!

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<class Derived >

CImage<T,A>& mds::img::CImage< T, Allocator >::operator*= ( const CImageBase< Derived > & Image ) [inherited]

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<typename U >

CImage<T,A>& mds::img::CImage< T, Allocator >::operator*= ( const CScalar & c ) [inherited]

template<typename T , template< typename > class A>

template<class Derived >

CImage< T, A > & mds::img::CImage< T, A >::operator+= ( const CImageBase< Derived > & Image ) [inherited]

Pixel wise addition.

template<typename T , template< typename > class A>

template<typename U >

CImage< T, A > & mds::img::CImage< T, A >::operator+= ( const CScalar & c ) [inherited]

Adds scalar to all pixels.

An operator that allows conversion from U to T must be defined!

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<class Derived >

CImage<T,A>& mds::img::CImage< T, Allocator >::operator+= ( const CImageBase< Derived > & Image ) [inherited]

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<typename U >

CImage<T,A>& mds::img::CImage< T, Allocator >::operator+= ( const CScalar & c ) [inherited]

template<typename T , template< typename > class A>

template<class Derived >

CImage< T, A > & mds::img::CImage< T, A >::operator-= ( const CImageBase< Derived > & Image ) [inherited]

Pixel wise subtraction.

template<typename T , template< typename > class A>

template<typename U >

CImage< T, A > & mds::img::CImage< T, A >::operator-= ( const CScalar & c ) [inherited]

Subtracts scalar from all pixels.

An operator that allows conversion U -> T must be defined!

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<class Derived >

CImage<T,A>& mds::img::CImage< T, Allocator >::operator-= ( const CImageBase< Derived > & Image ) [inherited]

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<typename U >

CImage<T,A>& mds::img::CImage< T, Allocator >::operator-= ( const CScalar & c ) [inherited]

template<typename T , template< typename > class A>

template<class Derived >

CImage< T, A > & mds::img::CImage< T, A >::operator/= ( const CImageBase< Derived > & Image ) [inherited]

Pixel wise division.

template<typename T , template< typename > class A>

template<typename U >

CImage< T, A > & mds::img::CImage< T, A >::operator/= ( const CScalar & c ) [inherited]

Divides all pixels by scalar.

An operator that allows conversion U -> T must be defined!

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<class Derived >

CImage<T,A>& mds::img::CImage< T, Allocator >::operator/= ( const CImageBase< Derived > & Image ) [inherited]

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<typename U >

CImage<T,A>& mds::img::CImage< T, Allocator >::operator/= ( const CScalar & c ) [inherited]

bool mds::img::CSlice::operator< ( const CSlice & Slice ) [inherited]

Operator smaller for comparision of positions of two slices.

CDicomSlice & mds::img::CDicomSlice::operator= ( const CDImage & Image ) [virtual]

Image assignment operator.

CDicomSlice & mds::img::CDicomSlice::operator= ( const CSlice & Slice ) [virtual]

Slice assignment operator.

Reimplemented from mds::img::CSlice.

CDicomSlice & mds::img::CDicomSlice::operator= ( const CDicomSlice & Slice ) [virtual]

Slice assignment operator.

template<typename T , template< typename > class A>

template<class Function >

Function mds::img::CImage< T, A >::pforEach ( Function Func ) [inherited]

Calls function object for every image pixel.

Parallel version.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class A>

template<class Function >

Function mds::img::CImage< T, A >::pforEach ( Function Func ) const [inherited]

Calls function object for every image pixel.

Parallel version.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<class Function >

Function mds::img::CImage< T, Allocator >::pforEach ( Function Func ) [inherited]

Calls a function object for every image pixel.

Parallel version.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

template<class Function >

Function mds::img::CImage< T, Allocator >::pforEach ( Function Func ) const [inherited]

Calls a function object for every image pixel.

Parallel version.

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

template<typename T , template< typename > class A>

CImage< T, A >::tRect CImage::rect	(	const CPoint2i &	Position,
		const CSize2i &	Size
	)		`[inherited]`

Returns a specified sub-image (i.e. rectangle).

template<typename T , template< typename > class A>

const CImage< T, A >::tRect mds::img::CImage< T, A >::rect	(	const CPoint2i &	Position,
		const CSize2i &	Size
	)		const `[inherited]`

template<typename T , template< typename > class A>

CImage< T, A >::tRect CImage::rect	(	const CRange &	XRange,
		const CRange &	YRange
	)		`[inherited]`

Returns a specified sub-image (i.e. rectangle).

template<typename T , template< typename > class A>

const CImage< T, A >::tRect mds::img::CImage< T, A >::rect	(	const CRange &	XRange,
		const CRange &	YRange
	)		const `[inherited]`

template<typename T , template< typename > class A>

CImage< T, A > & CImage::replace	(	const T &	Value,
		const T &	NewValue
	)		`[inherited]`

Replaces all pixels of a given value by a specified value.

Returns reference to this.

template<typename T , template< typename > class A>

CImage< T, A >::tRow CImage::row ( tSize y ) [inherited]

Returns a specified row.

template<typename T , template< typename > class A>

const CImage< T, A >::tRow mds::img::CImage< T, A >::row ( tSize y ) const [inherited]

template<class S >

void mds::img::CSlice::serialize ( mds::mod::CChannelSerializer< S > & Writer ) [inherited]

Serializes all class members.

Reimplemented from mds::img::CImage< T, Allocator >.

template<class S >

void mds::img::CSlice::serialize ( mds::mod::CChannelSerializer< S > & Writer ) [inherited]

Serializes all class members.

Reimplemented from mds::img::CImage< T, Allocator >.

tImage& mds::img::CImageBase< CImage< T, Allocator > >::set	(	tSize	x,
		tSize	y,
		const tPixel &	Value
	)		`[inherited]`

Sets the pixel at the position [x][y][z].

tImage& mds::img::CImageBase< CImage< T, Allocator > >::set	(	tSize	i,
		const tPixel &	Value
	)		`[inherited]`

Sets the subscripted pixel.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

CImage& mds::img::CImage< T, Allocator >::set	(	tSize	x,
		tSize	y,
		const T &	Value
	)		`[inherited]`

Sets the pixel at the position [x][y].

template<typename T , template< typename > class Allocator = mds::base::CRefData>

CImage& mds::img::CImage< T, Allocator >::set	(	tSize	i,
		const T &	Value
	)		`[inherited]`

Sets the subscripted voxel.

CSlice& mds::img::CSlice::setIndex ( int iIndex ) [inherited]

Sets the position index.

CSlice& mds::img::CSlice::setOrientation ( EPlane ePlane ) [inherited]

Sets the slice plane orientation.

CSlice& mds::img::CSlice::setPixel	(	double	dDX,
		double	dDY
	)		`[inherited]`

Sets the pixel size.

CSlice& mds::img::CSlice::setPosition ( double dPosition ) [inherited]

Sets the slice position.

CSlice& mds::img::CSlice::setThickness ( double dThickness ) [inherited]

Sets the slice thickness.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

CImage< T, A > & CImage::subSample	(	const CImage< T, Allocator > &	Image,
		tSize	k = `2`,
		tSize	l = `2`
	)		`[inherited]`

Subsamples a given image and stores the result.

Returns reference to this.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tSize mds::img::CImage< T, Allocator >::width ( ) const [inherited]

Returns the image size (dimensions).

Reimplemented from mds::img::CImageBase< CImage< T, Allocator > >.

Member Data Documentation

bool mds::img::CDicomSlice::m_bExplicitTransfer

Explicit transfer syntax.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tDataStorage mds::img::CImage< T, Allocator >::m_DataStorage [protected, inherited]

Image data.

double mds::img::CSlice::m_dDX [protected, inherited]

Real pixel size.

double mds::img::CSlice::m_dDY [protected, inherited]

double mds::img::CSlice::m_dPosition [protected, inherited]

Slice position.

double mds::img::CSlice::m_dThickness [protected, inherited]

Slice thickness.

EPlane mds::img::CSlice::m_eOrientation [protected, inherited]

Slice plane orientation.

int mds::base::CObject::m_iHeapObject [mutable, protected, inherited]

Flag initialized if the object is on the heap.

int mds::img::CSlice::m_iIndex [protected, inherited]

Position index.

CVector3D mds::img::CDicomSlice::m_ImageOrientationX

Slice X axis (first row) direction.

CVector3D mds::img::CDicomSlice::m_ImageOrientationY

Slice Y axis (first column) direction.

CPoint3D mds::img::CDicomSlice::m_ImagePosition

Slice base point position.

int mds::base::CObject::m_iReferences [mutable, protected, inherited]

The number of references to the object.

Zero if there is no reference.

int mds::img::CDicomSlice::m_iSeriesNumber

Series number.

int mds::img::CDicomSlice::m_iSliceNumber

Slice number.

int mds::img::CDicomSlice::m_iWindowCenter

Density window center position.

int mds::img::CDicomSlice::m_iWindowWidth

Density window width.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tSize mds::img::CImage< T, Allocator >::m_Margin [protected, inherited]

Image margin size.

std::string mds::img::CDicomSlice::m_sImageType

Image type.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

CSize2i mds::img::CImage< T, Allocator >::m_Size [protected, inherited]

Image dimensions.

std::string mds::img::CDicomSlice::m_sModality

Modality.

std::string mds::img::CDicomSlice::m_sPatientBirthday

Patient birthday.

std::string mds::img::CDicomSlice::m_sPatientDescription

Patient description.

std::string mds::img::CDicomSlice::m_sPatientId

Patient Id.

std::string mds::img::CDicomSlice::m_sPatientName

Patient name.

std::string mds::img::CDicomSlice::m_sPatientPosition

Patient position.

std::string mds::img::CDicomSlice::m_sPatientSex

Patient sex.

std::string mds::img::CDicomSlice::m_sScanOptions

Scan options (AXIAL, etc.).

std::string mds::img::CDicomSlice::m_sSeriesDate

Series date.

std::string mds::img::CDicomSlice::m_sSeriesDescription

Series description.

std::string mds::img::CDicomSlice::m_sSeriesTime

Series time.

std::string mds::img::CDicomSlice::m_sSeriesUid

Series Uid.

std::string mds::img::CDicomSlice::m_sSliceFileName

Slice file name.

std::string mds::img::CDicomSlice::m_sStudyDate

Study date.

std::string mds::img::CDicomSlice::m_sStudyDescription

Study description.

std::string mds::img::CDicomSlice::m_sStudyId

Study id.

std::string mds::img::CDicomSlice::m_sStudyUid

Study uid.

unsigned int mds::img::CDicomSlice::m_uPixelRepresentation

Pixel value representation.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tSize mds::img::CImage< T, Allocator >::m_YOffset [protected, inherited]

Offset used by subscripting functions.

template<typename T , template< typename > class Allocator = mds::base::CRefData>

tSize mds::img::CImage< T, Allocator >::m_ZeroOffset [protected, inherited]

Offset of the first pixel (0,0) from the beginning of data.

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Static Public Member Functions

Public Attributes

Protected Member Functions

Protected Attributes

Detailed Description

Member Typedef Documentation

Member Enumeration Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation